PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.A00430.1.p
Common NameLOC105975350, MIMGU_mgv1a009891mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 329aa    MW: 35340.2 Da    PI: 10.0976
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.A00430.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.52e-31243301259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       +D+y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+++dp ++++tYegeH+h+
  Migut.A00430.1.p 243 SDEYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERATDDPAMLIVTYEGEHRHT 301
                       69************************9888****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105334.6E-17195240IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.806.6E-33231302IPR003657WRKY domain
PROSITE profilePS5081131.284237303IPR003657WRKY domain
SuperFamilySSF1182901.96E-26240302IPR003657WRKY domain
SMARTSM007744.0E-37242302IPR003657WRKY domain
PfamPF031068.1E-27244300IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0009938Biological Processnegative regulation of gibberellic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:1990841Molecular Functionpromoter-specific chromatin binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MAVELLGYGN LNEQMAIQEA ASAGLKSMEH LIFAVSHQQQ QQQYRNQQID CREITDFTVS  60
KFRKVISILD RTGHARFRRG PVQPQTTALV AVQPQLETQK PAAPPTIYKP KPLSLFSLSP  120
ASPEPAAALP LTLDFTKPGK CLSAAMSTSG NSSSTFLSSI TGEGSVSNGK GGSPSMFLTP  180
SVAAVSAGKP PLSGKRCREH DHSDNLSGKT SGSSRCHCKK RKSRVKNTIR VPAISSKVAD  240
IPSDEYSWRK YGQKPIKGSP YPRGYYKCST VRGCPARKHV ERATDDPAML IVTYEGEHRH  300
TTTQGGAMQE IPAAGVAAPG QLVVFESS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-22230305276WRKY transcription factor 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00464DAPTransfer from AT4G31550Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012855995.10.0PREDICTED: probable WRKY transcription factor 17
SwissprotQ9SV151e-111WRK11_ARATH; Probable WRKY transcription factor 11
TrEMBLA0A022Q3560.0A0A022Q356_ERYGU; Uncharacterized protein
STRINGVIT_04s0069g00920.t011e-129(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31452250
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.21e-104WRKY DNA-binding protein 11